STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102388050Uncharacterized protein LOC102388050. (344 aa)    
Predicted Functional Partners:
LOC102376269
Uncharacterized protein LOC102376269.
 
     0.919
CUNH16orf71
Uncharacterized protein C16orf71 homolog.
 
     0.907
MRPS12
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
  
 0.768
MRPS10
28S ribosomal protein S10, mitochondrial isoform X2.
   
  0.762
MRPS6
28S ribosomal protein S6, mitochondrial.
   
  0.759
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 0.742
MRPS11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
  
 0.731
MRPS9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
  0.727
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
  0.722
MRNIP
MRN complex-interacting protein.
  
  0.722
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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