STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BGNBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (379 aa)    
Predicted Functional Partners:
ACAN
Aggrecan core protein.
     
 0.815
CSGALNACT2
Hexosyltransferase.
    
 0.704
CSGALNACT1
Hexosyltransferase.
    
 0.694
FMOD
Fibromodulin.
  
 
0.661
ATP6AP1L
V-type proton ATPase subunit S1-like protein isoform X1.
      
 0.641
BCAT1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
      
 0.641
LUM
Lumican.
  
 
0.635
LOC102377378
Adhesion G protein-coupled receptor L3-like.
    
   0.634
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
   0.634
ADGRL1
Adhesion G protein-coupled receptor L1 isoform X1; Belongs to the G-protein coupled receptor 2 family.
    
   0.634
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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