STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4Bsemaphorin-4B isoform X1; Belongs to the semaphorin family. (811 aa)    
Predicted Functional Partners:
MST1R
Macrophage-stimulating protein receptor isoform X1.
    
 0.633
MET
Hepatocyte growth factor receptor isoform X1.
    
 0.633
PLXND1
plexin-D1.
    
0.529
PLXNB2
plexin-B2 isoform X1.
    
0.505
PLXNB1
plexin-B1 isoform X1.
    
0.505
PLXNB3
plexin-B3 isoform X1.
    
0.505
PLXNA1
LOW QUALITY PROTEIN: plexin-A1.
    
0.495
PLXNA4
plexin-A4.
    
 0.480
LOC102373037
plexin-A4-like.
    
 0.480
PLXNC1
plexin-C1.
    
 0.480
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.