Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102387319 | SF3A1 | A0A1U7SN02 | A0A1U7RMC4 | Leucine-rich repeat-containing protein 51-like. | Splicing factor 3A subunit 1. | 0.906 |
LOC102387319 | SF3A3 | A0A1U7SN02 | A0A3Q0HBF1 | Leucine-rich repeat-containing protein 51-like. | Splicing factor 3A subunit 3. | 0.916 |
LOC102387319 | SF3B1 | A0A1U7SN02 | A0A1U7SGZ6 | Leucine-rich repeat-containing protein 51-like. | Splicing factor 3B subunit 1 isoform X1. | 0.906 |
LOC102387319 | SF3B3 | A0A1U7SN02 | A0A1U7S707 | Leucine-rich repeat-containing protein 51-like. | Splicing factor 3B subunit 3. | 0.901 |
LOC102387319 | SNRPD1 | A0A1U7SN02 | A0A3Q0GC92 | Leucine-rich repeat-containing protein 51-like. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.917 |
LOC102387319 | SNRPD2 | A0A1U7SN02 | A0A3Q0HDP0 | Leucine-rich repeat-containing protein 51-like. | Small nuclear ribonucleoprotein Sm D2. | 0.932 |
LOC102387319 | SNRPD3 | A0A1U7SN02 | A0A1U7RVU5 | Leucine-rich repeat-containing protein 51-like. | Small nuclear ribonucleoprotein Sm D3. | 0.934 |
LOC102387319 | SNRPE | A0A1U7SN02 | A0A1U8DLW7 | Leucine-rich repeat-containing protein 51-like. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.941 |
LOC102387319 | SNRPF | A0A1U7SN02 | A0A1U7S5Y4 | Leucine-rich repeat-containing protein 51-like. | Small nuclear ribonucleoprotein F. | 0.915 |
LOC102387319 | SNRPG | A0A1U7SN02 | A0A1U7S845 | Leucine-rich repeat-containing protein 51-like. | Small nuclear ribonucleoprotein G. | 0.921 |
SF3A1 | LOC102387319 | A0A1U7RMC4 | A0A1U7SN02 | Splicing factor 3A subunit 1. | Leucine-rich repeat-containing protein 51-like. | 0.906 |
SF3A1 | SF3A3 | A0A1U7RMC4 | A0A3Q0HBF1 | Splicing factor 3A subunit 1. | Splicing factor 3A subunit 3. | 0.999 |
SF3A1 | SF3B1 | A0A1U7RMC4 | A0A1U7SGZ6 | Splicing factor 3A subunit 1. | Splicing factor 3B subunit 1 isoform X1. | 0.990 |
SF3A1 | SF3B3 | A0A1U7RMC4 | A0A1U7S707 | Splicing factor 3A subunit 1. | Splicing factor 3B subunit 3. | 0.995 |
SF3A1 | SNRPD1 | A0A1U7RMC4 | A0A3Q0GC92 | Splicing factor 3A subunit 1. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.989 |
SF3A1 | SNRPD2 | A0A1U7RMC4 | A0A3Q0HDP0 | Splicing factor 3A subunit 1. | Small nuclear ribonucleoprotein Sm D2. | 0.960 |
SF3A1 | SNRPD3 | A0A1U7RMC4 | A0A1U7RVU5 | Splicing factor 3A subunit 1. | Small nuclear ribonucleoprotein Sm D3. | 0.951 |
SF3A1 | SNRPE | A0A1U7RMC4 | A0A1U8DLW7 | Splicing factor 3A subunit 1. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.969 |
SF3A1 | SNRPF | A0A1U7RMC4 | A0A1U7S5Y4 | Splicing factor 3A subunit 1. | Small nuclear ribonucleoprotein F. | 0.956 |
SF3A1 | SNRPG | A0A1U7RMC4 | A0A1U7S845 | Splicing factor 3A subunit 1. | Small nuclear ribonucleoprotein G. | 0.983 |
page 1 of 6