STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFF4AF4/FMR2 family member 4. (1175 aa)    
Predicted Functional Partners:
CCNT1
cyclin-T1; Belongs to the cyclin family.
   
 0.988
CDK9
Cyclin-dependent kinase 9.
    
 0.984
CCNT2
LOW QUALITY PROTEIN: cyclin-T2.
   
 0.925
EAF2
ELL-associated factor 2.
    
 0.896
EAF1
ELL-associated factor 1.
    
 0.892
ELL2
RNA polymerase II elongation factor ELL2 isoform X1.
   
 0.850
ELL
RNA polymerase II elongation factor ELL isoform X1.
   
 0.850
ELL3
RNA polymerase II elongation factor ELL3.
   
 0.850
MLLT3
Protein AF-9 isoform X1.
    
 0.844
MLLT1
Protein ENL isoform X1.
    
 0.844
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.