STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEAF1Deformed epidermal autoregulatory factor 1 homolog isoform X1. (511 aa)    
Predicted Functional Partners:
PHRF1
PHD and RING finger domain-containing protein 1 isoform X1.
   
  
 0.697
TMEM80
Transmembrane protein 80 isoform X1.
      
 0.696
EPS8L2
Epidermal growth factor receptor kinase substrate 8-like protein 2 isoform X1.
      
 0.693
ATP6V1F
V-type proton ATPase subunit F.
      
 0.641
ZMYND11
Zinc finger MYND domain-containing protein 11 isoform X1.
   
  
 0.561
TALDO1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
      
 0.449
HELZ
LOW QUALITY PROTEIN: probable helicase with zinc finger domain.
      
 0.449
ZMYND19
Zinc finger MYND domain-containing protein 19.
      
 0.422
IRF5
Interferon regulatory factor 5.
   
 
 0.414
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.