STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IKBKEInhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1. (752 aa)    
Predicted Functional Partners:
TANK
TRAF family member-associated NF-kappa-B activator isoform X1.
   
 0.992
TMEM173
Stimulator of interferon genes protein isoform X1.
   
 0.992
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.991
IRF3
Interferon regulatory factor 3 isoform X2.
   
 0.987
IRF7
Interferon regulatory factor 7.
   
 0.967
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1; Belongs to the peptidase C19 family.
   
 0.957
LOC102369160
Ubiquitin carboxyl-terminal hydrolase CYLD-like; Belongs to the peptidase C19 family.
   
 0.957
LOC102384158
Ubiquitin carboxyl-terminal hydrolase CYLD-like; Belongs to the peptidase C19 family.
   
 0.953
ZBP1
Z-DNA-binding protein 1 isoform X1.
   
 0.946
STAT1
Signal transducer and activator of transcription.
   
 0.943
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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