STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXK1Forkhead box protein K1. (607 aa)    
Predicted Functional Partners:
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1.
    
 0.784
ASXL2
Putative Polycomb group protein ASXL2.
    
 0.729
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.
    
 0.714
YY1
Transcriptional repressor protein YY1.
    
 0.564
LOC102388457
Host cell factor 1-like.
    
 0.545
HCFC2
Host cell factor 2.
    
 0.545
LOC102375077
Host cell factor 1.
    
 0.545
KDM1B
Lysine-specific histone demethylase 1B isoform X1.
    
 0.526
ASXL3
LOW QUALITY PROTEIN: putative Polycomb group protein ASXL3.
   
 0.511
ASXL1
LOW QUALITY PROTEIN: putative Polycomb group protein ASXL1.
   
 0.511
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.