Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHEK2 | LOC102374947 | A0A1U7RJ66 | A0A3Q0FNP2 | Serine/threonine-protein kinase Chk2. | Serine-protein kinase ATM-like. | 0.892 |
CHEK2 | MDM2 | A0A1U7RJ66 | A0A3Q0H065 | Serine/threonine-protein kinase Chk2. | E3 ubiquitin-protein ligase Mdm2 isoform X3. | 0.858 |
CHEK2 | MDM4 | A0A1U7RJ66 | A0A1U8DDY2 | Serine/threonine-protein kinase Chk2. | Protein Mdm4; Inhibits p53- and p73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Belongs to the MDM2/MDM4 family. | 0.763 |
CHEK2 | RPS27A | A0A1U7RJ66 | A0A1U7RD94 | Serine/threonine-protein kinase Chk2. | ubiquitin-40S ribosomal protein S27a. | 0.523 |
CHEK2 | TP53 | A0A1U7RJ66 | A0A3Q0FUE5 | Serine/threonine-protein kinase Chk2. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.994 |
CHEK2 | UBB | A0A1U7RJ66 | A0A3Q0HJE8 | Serine/threonine-protein kinase Chk2. | polyubiquitin-B. | 0.490 |
DAXX | MDM2 | A0A1U7SAW3 | A0A3Q0H065 | Death domain-associated protein 6. | E3 ubiquitin-protein ligase Mdm2 isoform X3. | 0.917 |
DAXX | MDM4 | A0A1U7SAW3 | A0A1U8DDY2 | Death domain-associated protein 6. | Protein Mdm4; Inhibits p53- and p73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Belongs to the MDM2/MDM4 family. | 0.768 |
DAXX | RPS27A | A0A1U7SAW3 | A0A1U7RD94 | Death domain-associated protein 6. | ubiquitin-40S ribosomal protein S27a. | 0.527 |
DAXX | TP53 | A0A1U7SAW3 | A0A3Q0FUE5 | Death domain-associated protein 6. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.917 |
DAXX | UBB | A0A1U7SAW3 | A0A3Q0HJE8 | Death domain-associated protein 6. | polyubiquitin-B. | 0.501 |
DAXX | USP7 | A0A1U7SAW3 | A0A3Q0GL13 | Death domain-associated protein 6. | Ubiquitin carboxyl-terminal hydrolase 7 isoform X1; Belongs to the peptidase C19 family. | 0.943 |
LOC102374947 | CHEK2 | A0A3Q0FNP2 | A0A1U7RJ66 | Serine-protein kinase ATM-like. | Serine/threonine-protein kinase Chk2. | 0.892 |
LOC102374947 | MDM2 | A0A3Q0FNP2 | A0A3Q0H065 | Serine-protein kinase ATM-like. | E3 ubiquitin-protein ligase Mdm2 isoform X3. | 0.824 |
LOC102374947 | MDM4 | A0A3Q0FNP2 | A0A1U8DDY2 | Serine-protein kinase ATM-like. | Protein Mdm4; Inhibits p53- and p73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Belongs to the MDM2/MDM4 family. | 0.748 |
LOC102374947 | RPS27A | A0A3Q0FNP2 | A0A1U7RD94 | Serine-protein kinase ATM-like. | ubiquitin-40S ribosomal protein S27a. | 0.574 |
LOC102374947 | TP53 | A0A3Q0FNP2 | A0A3Q0FUE5 | Serine-protein kinase ATM-like. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.927 |
LOC102374947 | UBB | A0A3Q0FNP2 | A0A3Q0HJE8 | Serine-protein kinase ATM-like. | polyubiquitin-B. | 0.551 |
MDM2 | CHEK2 | A0A3Q0H065 | A0A1U7RJ66 | E3 ubiquitin-protein ligase Mdm2 isoform X3. | Serine/threonine-protein kinase Chk2. | 0.858 |
MDM2 | DAXX | A0A3Q0H065 | A0A1U7SAW3 | E3 ubiquitin-protein ligase Mdm2 isoform X3. | Death domain-associated protein 6. | 0.917 |
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