Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EXO1 | FANCD2 | A0A1U7RRW4 | A0A1U8DK32 | Exonuclease 1. | Fanconi anemia group D2 protein isoform X1. | 0.658 |
EXO1 | FANCM | A0A1U7RRW4 | A0A3Q0GTE3 | Exonuclease 1. | Fanconi anemia group M protein isoform X1. | 0.902 |
EXO1 | FEN1 | A0A1U7RRW4 | A0A1U8D5E4 | Exonuclease 1. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.895 |
EXO1 | HELQ | A0A1U7RRW4 | A0A1U8DP21 | Exonuclease 1. | Helicase POLQ-like. | 0.634 |
EXO1 | MRE11 | A0A1U7RRW4 | A0A1U7REU1 | Exonuclease 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.983 |
EXO1 | MSRA | A0A1U7RRW4 | A0A1U7SCQ6 | Exonuclease 1. | Mitochondrial peptide methionine sulfoxide reductase isoform X1. | 0.446 |
EXO1 | NEIL3 | A0A1U7RRW4 | A0A1U8DIJ6 | Exonuclease 1. | Endonuclease 8-like 3. | 0.608 |
EXO1 | POLA1 | A0A1U7RRW4 | A0A1U7R9B9 | Exonuclease 1. | DNA polymerase. | 0.893 |
EXO1 | RAD50 | A0A1U7RRW4 | A0A1U7RTA8 | Exonuclease 1. | DNA repair protein RAD50 isoform X1. | 0.893 |
FANCD2 | EXO1 | A0A1U8DK32 | A0A1U7RRW4 | Fanconi anemia group D2 protein isoform X1. | Exonuclease 1. | 0.658 |
FANCD2 | FANCL | A0A1U8DK32 | A0A1U7R3Q7 | Fanconi anemia group D2 protein isoform X1. | E3 ubiquitin-protein ligase FANCL. | 0.998 |
FANCD2 | FANCM | A0A1U8DK32 | A0A3Q0GTE3 | Fanconi anemia group D2 protein isoform X1. | Fanconi anemia group M protein isoform X1. | 0.984 |
FANCD2 | FEN1 | A0A1U8DK32 | A0A1U8D5E4 | Fanconi anemia group D2 protein isoform X1. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.517 |
FANCD2 | HELQ | A0A1U8DK32 | A0A1U8DP21 | Fanconi anemia group D2 protein isoform X1. | Helicase POLQ-like. | 0.667 |
FANCD2 | MRE11 | A0A1U8DK32 | A0A1U7REU1 | Fanconi anemia group D2 protein isoform X1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.474 |
FANCD2 | NEIL3 | A0A1U8DK32 | A0A1U8DIJ6 | Fanconi anemia group D2 protein isoform X1. | Endonuclease 8-like 3. | 0.569 |
FANCD2 | POLA1 | A0A1U8DK32 | A0A1U7R9B9 | Fanconi anemia group D2 protein isoform X1. | DNA polymerase. | 0.485 |
FANCL | FANCD2 | A0A1U7R3Q7 | A0A1U8DK32 | E3 ubiquitin-protein ligase FANCL. | Fanconi anemia group D2 protein isoform X1. | 0.998 |
FANCL | FANCM | A0A1U7R3Q7 | A0A3Q0GTE3 | E3 ubiquitin-protein ligase FANCL. | Fanconi anemia group M protein isoform X1. | 0.999 |
FANCL | HELQ | A0A1U7R3Q7 | A0A1U8DP21 | E3 ubiquitin-protein ligase FANCL. | Helicase POLQ-like. | 0.554 |
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