STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX2LOW QUALITY PROTEIN: DNA-binding protein RFX2. (730 aa)    
Predicted Functional Partners:
ATR
Serine/threonine-protein kinase ATR isoform X1; Belongs to the PI3/PI4-kinase family.
    
 
 0.768
CHEK2
Serine/threonine-protein kinase Chk2.
   
 
 0.585
GMNC
Geminin coiled-coil domain-containing protein 1.
      
 0.550
MCIDAS
Multicilin.
      
 0.544
FOXJ1
Forkhead box protein J1 isoform X3.
    
 
 0.443
FOXJ2
Forkhead box protein J2 isoform X1.
    
 
 0.437
LOC102368829
Forkhead box protein D3-like.
    
 
 0.436
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.