STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZ2BBromodomain adjacent to zinc finger domain protein 2B. (2239 aa)    
Predicted Functional Partners:
LOC102380063
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like.
    
 0.703
SMARCA1
Probable global transcription activator SNF2L1 isoform X1.
    
 0.703
LOC102379885
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
    
 0.703
POLE3
DNA polymerase epsilon subunit 3.
    
 
 0.686
CHD1L
chromodomain-helicase-DNA-binding protein 1-like isoform X1.
    
 0.662
HELLS
Lymphoid-specific helicase.
    
 0.662
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.644
MYBBP1A
Myb-binding protein 1A.
    
 0.600
DEK
Protein DEK isoform X1.
    
 0.595
ERCC6
DNA excision repair protein ERCC-6 isoform X1.
    
 0.569
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.