STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUNH7orf50Uncharacterized protein C7orf50 homolog isoform X1. (183 aa)    
Predicted Functional Partners:
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
  
 0.712
DNTTIP2
Deoxynucleotidyltransferase terminal-interacting protein 2.
   
  
 0.631
DKC1
H/ACA ribonucleoprotein complex subunit 4.
   
   0.624
FDXACB1
LOW QUALITY PROTEIN: ferredoxin-fold anticodon-binding domain-containing protein 1.
   
  
 0.583
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
    0.564
TMA16
Translation machinery-associated protein 16.
   
  
 0.546
SURF6
Surfeit locus protein 6.
   
   0.519
NEXN
Nexilin isoform X1.
   
   0.518
PUM3
LOW QUALITY PROTEIN: pumilio homolog 3.
   
  
 0.516
UTP14A
U3 small nucleolar RNA-associated protein 14 homolog A.
   
    0.499
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.