STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL25Kelch-like protein 25 isoform X1. (611 aa)    
Predicted Functional Partners:
CUL3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.830
PLAGL2
Zinc finger protein PLAGL2.
    
 0.703
ZIC1
Zinc finger protein ZIC 1 isoform X1.
    
 0.698
SNX33
Sorting nexin.
      
 0.693
KLHL22
Kelch-like protein 22 isoform X1.
    
 
0.615
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
    
 0.612
KBTBD8
Kelch repeat and BTB domain-containing protein 8.
  
 
0.576
LOC102378097
Myosin-6 isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.567
UBE2M
NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.565
DCUN1D4
DCN1-like protein.
     
 0.558
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.