STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC10Kelch domain-containing protein 10. (391 aa)    
Predicted Functional Partners:
NUDT12
LOW QUALITY PROTEIN: peroxisomal NADH pyrophosphatase NUDT12.
    
 0.582
EPHX4
Epoxide hydrolase 4.
      
 0.541
MKLN1
Muskelin isoform X1.
      
 0.539
DCAF10
DDB1- and CUL4-associated factor 10.
      
 0.475
UBE2H
Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.465
DRG1
Developmentally-regulated GTP-binding protein 1.
    
   0.426
CUNHXorf56
UPF0428 protein CXorf56 homolog.
   
   0.422
GRN
Granulins.
    
   0.407
POLE2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.407
CS
Citrate synthase; Belongs to the citrate synthase family.
    
   0.407
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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