STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102388378COMM domain-containing protein 5-like. (246 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.992
COMMD10
COMM domain-containing protein 10.
   
 0.953
COMMD2
COMM domain-containing protein 2.
    
 0.949
COMMD4
COMM domain-containing protein 4.
   
 0.908
CCDC22
LOW QUALITY PROTEIN: coiled-coil domain-containing protein 22.
    
 0.903
COMMD1
COMM domain-containing protein 1 isoform X1.
    
 0.886
COMMD9
COMM domain-containing protein 9.
   
 0.855
COMMD8
COMM domain-containing protein 8.
   
 0.849
COMMD7
COMM domain-containing protein 7 isoform X1.
   
 0.842
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
  0.820
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.