STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS6KA2Ribosomal protein S6 kinase. (733 aa)    
Predicted Functional Partners:
MAPK1
Mitogen-activated protein kinase.
   
0.956
LOC102375250
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.956
TSC2
Tuberin isoform X1.
    
 0.930
TSC1
LOW QUALITY PROTEIN: hamartin.
    
 0.917
TBC1D7
TBC1 domain family member 7 isoform X1.
     
 0.910
ATF4
Cyclic AMP-dependent transcription factor ATF-4 isoform X1.
     
 0.904
PKMYT1
Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase; Belongs to the protein kinase superfamily.
     
 
0.900
BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
     
  0.900
RINT1
RAD50-interacting protein 1 isoform X1.
    
 0.752
STX18
Syntaxin-18.
    
 0.746
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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