STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs0027Hypothetical protein; Similar to B0024_ECOLI gi|1786207 percent identity 94 in 74 aa (Conserved in E.coli K-12). (74 aa)    
Predicted Functional Partners:
ECs0028
Putative regulator; Similar to RIBF_ECOLI gi|1786208 percent identity 100 in 313 aa (Conserved in E.coli K-12).
     
 0.844
ECs0029
Isoleucine tRNA synthetase; Similar to ILES_ECOLI gi|2367096 percent identity 99 in 938 aa (Conserved in E.coli K-12).
       0.638
ECs0030
Prolipoprotein signal peptidase; Similar to LSPA_ECOLI gi|1786210 percent identity 98 in 164 aa (Conserved in E.coli K-12).
       0.638
ECs0026
30S ribosomal subunit protein S20; Similar to RPST_ECOLI gi|1786206 percent identity 98 in 87 aa (Conserved in E.coli K-12).
     
 0.606
ECs0031
Putative FKBX-type 16KD peptidyl-prolyl cis-trans isomerase; Similar to SLPA_ECOLI gi|1786211 percent identity 100 in 149 aa (Conserved in E.coli K-12).
       0.453
ECs0032
Similar to LYTB_ECOLI gi|1786212 percent identity 100 in 316 aa (Conserved in E.coli K-12).
       0.453
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.