STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs0116Aromatic amino acid transport protein; Similar to AROP_ECOLI gi|1786302 percent identity 99 in 457 aa (Conserved in E.coli K-12). (457 aa)    
Predicted Functional Partners:
ECs1902
Transcription regulator tyrR; Similar to TYRR_ECOLI gi|1787583 percent identity 99 in 513 aa (Conserved in E.coli K-12).
      
 0.815
ECs2615
Tyrosine-specific transport system; Similar to TYRP_ECOLI gi|1788218 percent identity 99 in 403 aa (Conserved in E.coli K-12).
      
 0.813
ECs4042
Tryptophan-specific transport protein; Similar to MTR_ECOLI gi|1789552 percent identity 99 in 414 aa (Conserved in E.coli K-12).
      
 0.813
ECs3692
Putative resistance proteins; Similar to YGED_ECOLI gi|1789200 percent identity 99 in 397 aa (Conserved in E.coli K-12).
      
 0.807
ECs4646
Low affinity tryptophan permease; Similar to TNAB_ECOLI gi|1790145 percent identity 99 in 415 aa (Conserved in E.coli K-12).
      
 0.777
ECs4521
Hypothetical protein; Similar to YICG_ECOLI gi|1790078 percent identity 99 in 223 aa (Conserved in E.coli K-12).
      
 0.663
ECs5036
Tyrosine aminotransferase; Similar to TYRB_ECOLI gi|1790488 percent identity 98 in 397 aa (Conserved in E.coli K-12).
   
  
 0.599
ECs4221
Putative amino acid/amine transport protein; Similar to YHFM_ECOLI gi|2367216 percent identity 99 in 462 aa (Conserved in E.coli K-12).
  
   
 0.461
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.