STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs0298Head size determination,similar to head size determination proteins e.g. Sid [phage phi-R73] gi|93821|pir||F42465 percent identity 22 in 236 aa. (250 aa)    
Predicted Functional Partners:
ECs0296
Probable transcription activator,similar to Ogr family e.g. LsrS [Rahnella aquatilis] gi|93826|pir||E42465 percent identity 41 in 65 aa, delta protein [phage phi-R73] gi|93826|pir||E42465 percent identity 36 in 76 aa.
       0.773
ECs0297
Probable polarity suppression protein (amber mutation-suppression protein),similar to Psu like proteins e.g. Psu [Bacteriophage P4] gi|1351414|sp|P05460|VPSU_BPP4 percent identity 30 in 166 aa.
       0.773
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
Server load: low (20%) [HD]