Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ECs0305 | ECs0306 | gene:10363291 | gene:10363292 | Hypothetical protein; C-terminal part (188-299 in 299 aa) is similar to YAGP_ECOLI gi|1786476 percent identity 98 in 112 aa. | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | 0.668 |
ECs0306 | ECs0305 | gene:10363292 | gene:10363291 | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | Hypothetical protein; C-terminal part (188-299 in 299 aa) is similar to YAGP_ECOLI gi|1786476 percent identity 98 in 112 aa. | 0.668 |
ECs0306 | ECs0307 | gene:10363292 | gene:10363293 | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | Hypothetical membrane protein. | 0.463 |
ECs0306 | ECs0625 | gene:10363292 | gene:10363613 | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | Enterobactin synthetase component EntF; Similar to ENTF_ECOLI gi|1786801 percent identity 97 in 1293 aa (Conserved in E.coli K-12). | 0.720 |
ECs0306 | ECs3434 | gene:10363292 | gene:10366484 | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | Signal peptidase I; Similar to LEPB_ECOLI gi|1788921 percent identity 99 in 324 aa (Conserved in E.coli K-12). | 0.489 |
ECs0306 | ECs5226 | gene:10363292 | gene:10368341 | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | Putative oxidoreductase; Similar to YJGI_ECOLI gi|2367365 percent identity 98 in 237 aa (Conserved in E.coli K-12). | 0.527 |
ECs0307 | ECs0306 | gene:10363293 | gene:10363292 | Hypothetical membrane protein. | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | 0.463 |
ECs0625 | ECs0306 | gene:10363613 | gene:10363292 | Enterobactin synthetase component EntF; Similar to ENTF_ECOLI gi|1786801 percent identity 97 in 1293 aa (Conserved in E.coli K-12). | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | 0.720 |
ECs3434 | ECs0306 | gene:10366484 | gene:10363292 | Signal peptidase I; Similar to LEPB_ECOLI gi|1788921 percent identity 99 in 324 aa (Conserved in E.coli K-12). | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | 0.489 |
ECs5226 | ECs0306 | gene:10368341 | gene:10363292 | Putative oxidoreductase; Similar to YJGI_ECOLI gi|2367365 percent identity 98 in 237 aa (Conserved in E.coli K-12). | Probable oxidoreductase,similar to oxidoreductases e.g. [Streptomyces coelicolor A3(2)] gi|6137024|emb|CAB59579.1| percent identity 55 in 237 aa. | 0.527 |