STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs0378Putative permease of ABC transporter; Probable ABC transport system permease,similar to ABC transport system permeases e.g. RbsC [Escherichia coli] gi|78833|pir||C26304 percent identity 35 in 291 aa, [Bacillus subtilis] gi|7446897|pir||B69690 percent identity 34 in 290 aa. (318 aa)    
Predicted Functional Partners:
ECs0376
Probable ABC transporter ATP binding protein,similar to C-terminal part of sugar ABC transporter ATP-binding proteins e.g. [Bacillus subtilis] gi|7404442|sp|P36947|RBSA_BACSU percent identity 36 in 380 aa.
  0.967
ECs0374
Probable sugar-binding protein,similar to sugar-binding proteins e.g. b1516 [Escherichia coli] gi|7466925|pir||G64905 percent identity 27 in 309 aa.
 0.884
ECs4693
D-ribose periplasmic binding protein; Similar to RBSB_ECOLI gi|1790192 percent identity 99 in 296 aa (Conserved in E.coli K-12).
 0.852
ECs0377
Probable ABC transporter (permease),similar to ABC transport system permeases e.g. RbsC[Bacillus subtilis] gi|7446897|pir||B69690 percent identity 34 in 299 aa, [Escherichia coli] gi|400960|sp|P04984|RBSC_ECOLI percent identity 31 in 298 aa.
 
    
0.851
ECs4691
ATP-binding component of D-ribose high-affinity transport system; Similar to RBSA_ECOLI gi|1790190 percent identity 99 in 501 aa (Conserved in E.coli K-12).
 
  0.849
ECs5073
Probable sugar ABC transporter, ATP-binding protein,similar to sugar ABC transporter, ATP-binding proteins e.g. ribose ABC transporter (ATP-binding protein) rbsA [Bacillus subtilis] gi|7404442|sp|P36947|RBSA_BACSU percent identity 45 in 489 aa.
 
  0.838
ECs2608
ATP-binding component of high-affinity L-arabinose transport system; Similar to ARAG_ECOLI gi|1788210 percent identity 100 in 504 aa (Conserved in E.coli K-12).
 
  0.837
ECs3041
ATP-binding component of methyl-galactoside transport system; Similar to MGLA_ECOLI gi|1788472 percent identity 99 in 506 aa (Conserved in E.coli K-12).
 
  0.833
ECs2120
Putative ATP-binding component of a transport system; Similar to B1513_ECOLI gi|1787792 percent identity 97 in 511 aa (Conserved in E.coli K-12).
 
  0.826
ECs4450
Putative ATP-binding protein of xylose transport system; Similar to XYLG_ECOLI gi|1789991 percent identity 99 in 513 aa (Conserved in E.coli K-12).
 
  0.825
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.