STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs0657Citrate lyase synthetase (citrate (pro-3S)-lyase ligase; Similar to CITC_ECOLI gi|1786835 percent identity 98 in 381 aa (Conserved in E.coli K-12). (381 aa)    
Predicted Functional Partners:
ECs0656
Citrate lyase acyl carrier protein gamma chain; Similar to CITD_ECOLI gi|1786834 percent identity 100 in 98 aa (Conserved in E.coli K-12).
 
  
 0.997
ECs0652
Hypothetical protein; Similar to CITG_ECOLI gi|1786830 percent identity 98 in 292 aa (Conserved in E.coli K-12).
  
 0.994
ECs0654
Citrate lyase alpha chain; Similar to CITF_ECOLI gi|1786832 percent identity 99 in 510 aa (Conserved in E.coli K-12).
 
  
 0.993
ECs0653
Hypothetical protein; Similar to YBDU_ECOLI gi|1786831 percent identity 100 in 183 aa (Conserved in E.coli K-12).
 
 
 0.992
ECs0655
Citrate lyase beta chain; Similar to CITE_ECOLI gi|1786833 percent identity 99 in 307 aa (Conserved in E.coli K-12).
 
  
 0.991
ECs0658
Putative sensor-type protein; Similar to CITA_ECOLI gi|1786837 percent identity 99 in 552 aa (Conserved in E.coli K-12).
 
   
 0.835
ECs0659
Putative response regulator protein CitB; Similar to CITB_ECOLI gi|1786838 percent identity 100 in 226 aa (Conserved in E.coli K-12).
 
   
 0.821
ECs0651
Putative membrane protein; Similar to YBDS_ECOLI gi|1786829 percent identity 100 in 487 aa (Conserved in E.coli K-12).
 
  
 0.802
ECs1345
Unknown,similar to hypothetical proteins e.g. [Deinococcus radiodurans] gi|7472167|pir||B75302 percent identity 42 in 305 aa.
  
  
 0.679
ECs0761
3-methylaspartate ammonia-lyase (beta-methylaspartase),similar to 3-methylaspartate ammonia-lyases (beta-methylaspartases) e.g. [Citrobacter amalonaticus] gi|3184397|dbj|BAA28709.1| percent identity 93 in 413; [Clostridium tetanomorphum] gi|729971|sp.
 
     0.421
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.