STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs0675Hypothetical protein; Similar to YBEB_ECOLI gi|1786856 percent identity 100 in 69 aa (Conserved in E.coli K-12). (69 aa)    
Predicted Functional Partners:
ECs0674
Hypothetical protein; Similar to YBEA_ECOLI gi|1786855 percent identity 99 in 155 aa (Conserved in E.coli K-12).
 
  
 0.961
ECs4062
Putative GTP-binding factor; Similar to YHBZ_ECOLI gi|1789574 percent identity 99 in 390 aa (Conserved in E.coli K-12).
  
 
 0.885
ECs4175
50S ribosomal subunit protein L14; Similar to RPLN_ECOLI gi|1789706 percent identity 100 in 123 aa (Conserved in E.coli K-12).
    
 
 0.828
ECs4174
50S ribosomal subunit protein L24; Similar to RPLX_ECOLI gi|1789705 percent identity 100 in 104 aa (Conserved in E.coli K-12).
  
 
 0.824
ECs5211
Putative alpha helix protein; Similar to YJGA_ECOLI gi|1790681 percent identity 100 in 183 aa (Conserved in E.coli K-12).
    
 
 0.819
ECs3457
Suppressor of ftsH mutation; Similar to SFHB_ECOLI gi|1788946 percent identity 99 in 326 aa (Conserved in E.coli K-12).
  
 
 0.814
ECs3077
50S ribosomal subunit protein L25; Similar to RPLY_ECOLI gi|1788512 percent identity 98 in 94 aa (Conserved in E.coli K-12).
 
 
 
 0.813
ECs1467
50S ribosomal subunit protein L32; Identical to RPMF_ECOLI gi|1787330 (Conserved in E.coli K-12).
  
 
 0.808
ECs2424
50S ribosomal subunit protein A; Identical to RPMI_ECOLI gi|1788010 (Conserved in E.coli K-12).
   
 
 0.804
ECs2423
50S ribosomal subunit protein L20; Similar to RPLT_ECOLI gi|1788009 percent identity 100 in 118 aa (Conserved in E.coli K-12).
   
 
 0.799
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.