STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs0919D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6; Similar to DACC_ECOLI gi|1787062 percent identity 99 in 400 aa (Conserved in E.coli K-12). (400 aa)    
Predicted Functional Partners:
ECs4061
D-alanyl-D-alanine carboxypeptidase; Similar to penicillin-binding protein 4 DACB_ECOLI gi|1789573 percent identity 99 in 477 aa (Conserved in E.coli K-12).
     
 0.982
ECs3301
Similar to putative beta-lactamase B2430_ECOLI gi|1788770 percent identity 98 in 462 aa but differs at N-ter (Conserved in E.coli K-12).
     
 0.980
ECs4238
Peptidoglycan synthetase; Similar to penicillin-binding protein 1A MRCA_ECOLI gi|1789799 percent identity 99 in 858 aa (Conserved in E.coli K-12).
     
 0.961
ECs2812
Penicillin binding protein 6b; Similar to DACD_ECOLI gi|1788320 percent identity 99 in 390 aa (Conserved in E.coli K-12).
  
  
 
0.905
ECs0670
D-alanyl-D-alanine carboxypeptidase fraction A; Similar to DACA_ECOLI gi|1786851 percent identity 99 in 403 aa (Conserved in E.coli K-12).
  
  
 
0.902
ECs0673
Peptidoglycan synthetase penicillin-binding protein 2; Similar to MRDA_ECOLI gi|1786854 percent identity 100 in 633 aa (Conserved in E.coli K-12).
 
  
 0.723
ECs0088
Septum formation protein FtsI; Similar to FTSI_ECOLI gi|1786272 percent identity 100 in 588 aa (Conserved in E.coli K-12).
 
  
 0.706
ECs1008
Putative amidase; Similar to YCBB_ECOLI gi|1787155 percent identity 99 in 615 aa (Conserved in E.coli K-12).
   
 
 0.654
ECs3385
Penicillin binding protein 1C; Similar to PBPC_ECOLI gi|1788867 percent identity 98 in 770 aa (Conserved in E.coli K-12).
     
 0.636
ECs0153
Peptidoglycan synthetase MrcB; Similar to MRCB_ECOLI gi|1786343 percent identity 99 in 844 aa (Conserved in E.coli K-12).
   
  
 0.618
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.