STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs1268Hypothetical protein; Similar to YCDQ_ECOLI gi|1787259 percent identity 99 in 441 aa (Conserved in E.coli K-12). (441 aa)    
Predicted Functional Partners:
ECs1270
Putative outer membrane protein; Similar to YCDS_ECOLI gi|1787261 percent identity 100 in 807 aa (Conserved in E.coli K-12).
 
   
 0.989
ECs1267
Hypothetical protein; Similar to YCDP_ECOLI gi|1787258 percent identity 100 in 137 aa (Conserved in E.coli K-12).
    
 0.988
ECs1269
Hypothetical protein; Similar to YCDR_ECOLI gi|1787260 percent identity 99 in 672 aa (Conserved in E.coli K-12).
 
  
 0.974
ECs4412
Hypothetical protein; Similar to YHJN_ECOLI gi|1789952 percent identity 98 in 785 aa (Conserved in E.coli K-12).
  
 
 0.569
ECs2874
Hypothetical protein; Unknown,similar to N-terminal part (1-152 in 1105 aa) of putative sensor-type protein YEGE_ECOLI gi|1788381 percent identity 99 in 152 aa.
  
  
 0.534
ECs2875
Hypothetical protein; Similar to central part (157-322 in 1015 aa) of putative sensor-type protein YEGE_ECOLI gi|1788381 percent identity 93 in 166 aa, TTG start.
  
  
 0.534
ECs2876
Hypothetical protein; Similar to C-terminal part (314-1105 in 1105 aa) of putative sensor-type protein YEGE_ECOLI gi|1788381 percent identity 98 in 794 aa.
  
  
 0.534
ECs0134
Hypothetical protein; Similar to YADE_ECOLI gi|1786322 percent identity 98 in 409 aa (Conserved in E.coli K-12).
  
  
 0.532
ECs2094
Oxygen sensing protein; Similar to N-terminal part (position 1-408 in 799 aa) of YDDU_ECOLI (Dos) gi|3915427|sp|P76129 percent identity 99 in 408 aa (interrupted).
 
  
 0.528
ECs3144
Hypothetical protein; Similar to B2256_ECOLI gi|1788590 percent identity 99 in 296 aa (Conserved in E.coli K-12).
  
  
 0.482
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.