Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ECs0783 | ECs1434 | gene:10363784 | gene:10364445 | Similar to GPMA_ECOLI gi|1786970 percent identity 100 in 250 aa (Conserved in E.coli K-12). | Hypothetical protein; Similar to YCEI_ECOLI gi|1787295 percent identity 100 in 191 aa (Conserved in E.coli K-12). | 0.501 |
ECs1434 | ECs0783 | gene:10364445 | gene:10363784 | Hypothetical protein; Similar to YCEI_ECOLI gi|1787295 percent identity 100 in 191 aa (Conserved in E.coli K-12). | Similar to GPMA_ECOLI gi|1786970 percent identity 100 in 250 aa (Conserved in E.coli K-12). | 0.501 |
ECs1434 | ECs1435 | gene:10364445 | gene:10364446 | Hypothetical protein; Similar to YCEI_ECOLI gi|1787295 percent identity 100 in 191 aa (Conserved in E.coli K-12). | Putative cytochrome; Similar to B1057_ECOLI gi|1787296 percent identity 99 in 188 aa (Conserved in E.coli K-12). | 0.961 |
ECs1434 | ECs1436 | gene:10364445 | gene:10364447 | Hypothetical protein; Similar to YCEI_ECOLI gi|1787295 percent identity 100 in 191 aa (Conserved in E.coli K-12). | Hypothetical protein; Identical to YCEO_ECOLI gi|1787297 (Conserved in E.coli K-12). | 0.419 |
ECs1435 | ECs1434 | gene:10364446 | gene:10364445 | Putative cytochrome; Similar to B1057_ECOLI gi|1787296 percent identity 99 in 188 aa (Conserved in E.coli K-12). | Hypothetical protein; Similar to YCEI_ECOLI gi|1787295 percent identity 100 in 191 aa (Conserved in E.coli K-12). | 0.961 |
ECs1435 | ECs1436 | gene:10364446 | gene:10364447 | Putative cytochrome; Similar to B1057_ECOLI gi|1787296 percent identity 99 in 188 aa (Conserved in E.coli K-12). | Hypothetical protein; Identical to YCEO_ECOLI gi|1787297 (Conserved in E.coli K-12). | 0.419 |
ECs1436 | ECs1434 | gene:10364447 | gene:10364445 | Hypothetical protein; Identical to YCEO_ECOLI gi|1787297 (Conserved in E.coli K-12). | Hypothetical protein; Similar to YCEI_ECOLI gi|1787295 percent identity 100 in 191 aa (Conserved in E.coli K-12). | 0.419 |
ECs1436 | ECs1435 | gene:10364447 | gene:10364446 | Hypothetical protein; Identical to YCEO_ECOLI gi|1787297 (Conserved in E.coli K-12). | Putative cytochrome; Similar to B1057_ECOLI gi|1787296 percent identity 99 in 188 aa (Conserved in E.coli K-12). | 0.419 |