STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs1466Hypothetical protein; Similar to YCED_ECOLI gi|1787329 percent identity 100 in 173 aa (Conserved in E.coli K-12). (173 aa)    
Predicted Functional Partners:
ECs1467
50S ribosomal subunit protein L32; Identical to RPMF_ECOLI gi|1787330 (Conserved in E.coli K-12).
 
  
 0.961
ECs4179
30S ribosomal subunit protein S3; Similar to RPSC_ECOLI gi|1789710 percent identity 100 in 233 aa (Conserved in E.coli K-12).
   
   0.867
ECs4906
50S ribosomal subunit protein L11; Similar to RPLK_ECOLI gi|2367334 percent identity 100 in 142 aa (Conserved in E.coli K-12).
   
    0.834
ECs4907
50S ribosomal subunit protein L1; Similar to RPLA_ECOLI gi|1790416 percent identity 100 in 234 aa (Conserved in E.coli K-12).
   
  
 0.830
ECs3471
Hypothetical protein; Similar to YFJA_ECOLI gi|1788960 percent identity 99 in 185 aa (Conserved in E.coli K-12).
 
    0.808
ECs5177
Primosomal replication protein N; Similar to PRIB_ECOLI gi|1790645 percent identity 99 in 104 aa (Conserved in E.coli K-12).
  
    0.808
ECs0171
30S ribosomal subunit protein S2; Similar to RPSB_ECOLI gi|1786365 percent identity 100 in 241 aa (Conserved in E.coli K-12).
  
    0.788
ECs5176
30S ribosomal subunit protein S6; Similar to RPSF_ECOLI gi|1790644 percent identity 100 in 131 aa (Conserved in E.coli K-12).
  
    0.788
ECs2425
Protein chain initiation factor IF-3; Similar to INFC_ECOLI gi|1788012 percent identity 99 in 180 aa, ATT start (Conserved in E.coli K-12).
  
    0.785
ECs3472
30S ribosomal subunit protein S16; Similar to RPSP_ECOLI gi|1788961 percent identity 100 in 82 aa (Conserved in E.coli K-12).
  
    0.785
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.