Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ECs1625 | ECs1626 | gene:10364636 | gene:10364637 | Unknown, similar to Bor protein precursors e.g. [Bacteriophage lambda] gi|137520|sp|P26814|VBOR_LAMBD percent identity 98 in 97 aa. | Unknown, similar to hypothetical proteins e.g. YbcV [Escherichia coli] gi|2495556|sp|P77598|YBCV_ECOLI percent identity 98 in 150 aa. | 0.409 |
ECs1626 | ECs1625 | gene:10364637 | gene:10364636 | Unknown, similar to hypothetical proteins e.g. YbcV [Escherichia coli] gi|2495556|sp|P77598|YBCV_ECOLI percent identity 98 in 150 aa. | Unknown, similar to Bor protein precursors e.g. [Bacteriophage lambda] gi|137520|sp|P26814|VBOR_LAMBD percent identity 98 in 97 aa. | 0.409 |
ECs1626 | ECs1627 | gene:10364637 | gene:10364638 | Unknown, similar to hypothetical proteins e.g. YbcV [Escherichia coli] gi|2495556|sp|P77598|YBCV_ECOLI percent identity 98 in 150 aa. | Hypothetical protein; Unknown, identical to YbcW [Escherichia coli] gi|2495557|sp|P75720|YBCW_ECOLI. | 0.609 |
ECs1627 | ECs1626 | gene:10364638 | gene:10364637 | Hypothetical protein; Unknown, identical to YbcW [Escherichia coli] gi|2495557|sp|P75720|YBCW_ECOLI. | Unknown, similar to hypothetical proteins e.g. YbcV [Escherichia coli] gi|2495556|sp|P77598|YBCV_ECOLI percent identity 98 in 150 aa. | 0.609 |