STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs1866Probable membrane transport protein,similar to membrane transport proteins e.g. [Streptomyces coelicolor A3(2)] gi|6469269|emb|CAB61730.1| percent identity 38 in 380 aa. (387 aa)    
Predicted Functional Partners:
ECs1865
Probable outer membrane channel protein,similar to outer membrane channel proteins e.g. OprM [Pseudomonas aeruginosa] gi|3184190|dbj|BAA28694.1| percent identity 43 in 448 aa.
  
    0.770
ECs1864
Probable multidrug-efflux transport proteinsimilar to multidrug-efflux transport proteins e.g. AcrB [Escherichia coli K-12] gi|399001|sp|P31224|ACRB_ECOLI percent identity 56 in 974 aa.
   
  0.718
ECs1863
Probable multidrug-efflux transport protein precursor,similar to multidrug-efflux transport protein precursors e.g. AcrA [Escherichia coli K-12] gi|399000|sp|P31223|ACRA_ECOLI percent identity 51 in 358 aa.
  
    0.699
ECs1862
Probable transcription regulatory protein,similar to transcription regulatory proteins e.g. UidR [Escherichia coli] gi|2495429|sp|Q59431|UIDR_ECOLI percent identity 30 in 123 aa.
       0.447
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.