STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs1900Putative enzyme; Similar to YCJX_ECOLI gi|1787581 percent identity 99 in 465 aa (Conserved in E.coli K-12). (465 aa)    
Predicted Functional Partners:
ECs1901
Hypothetical protein; Similar to YCJF_ECOLI gi|1787582 percent identity 99 in 353 aa (Conserved in E.coli K-12).
 
  
 0.998
ECs3212
Murein DD-endopeptidase; Similar to MEPA_ECOLI gi|1788668 percent identity 98 in 274 aa (Conserved in E.coli K-12).
  
     0.639
ECs1902
Transcription regulator tyrR; Similar to TYRR_ECOLI gi|1787583 percent identity 99 in 513 aa (Conserved in E.coli K-12).
  
  
 0.578
ECs1899
Putative LACI-type transcriptional regulator; Similar to YCJW_ECOLI gi|1787580 percent identity 98 in 332 aa (Conserved in E.coli K-12).
       0.521
ECs0251
Hypothetical protein; Similar to YAFK_ECOLI gi|1786418 percent identity 100 in 246 aa (Conserved in E.coli K-12).
  
     0.477
ECs1009
Hypothetical protein; Similar to YCBK_ECOLI gi|1787157 percent identity 100 in 182 aa (Conserved in E.coli K-12).
  
     0.477
ECs4922
Hypothetical protein; Similar to YJAG_ECOLI gi|1790432 percent identity 99 in 196 aa (Conserved in E.coli K-12).
  
     0.451
ECs0555
Putative thioredoxin-like protein; Similar to YBBN_ECOLI gi|1786700 percent identity 99 in 296 aa (Conserved in E.coli K-12).
   
  
 0.424
ECs4755
Lysophospholipase L(2); Similar to PLDB_ECOLI gi|2367303 percent identity 99 in 340 aa (Conserved in E.coli K-12).
  
     0.406
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.