STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs1957Unknown,similar to hypothetical proteins e.g. YbcO [Escherichia coli cryptic prophage DLP12] gi|7467043|pir||C64787 percent identity 57 in 96 aa, Gp66 [Bacteriophage HK97] gi|6901638|gb|AAF31141.1| percent identity 56 in 94 aa. (96 aa)    
Predicted Functional Partners:
ECs1956
Hypothetical protein; Unknown,similar to Orf79 [Bacteriophage D3] gi|8895177|gb|AAF80835.1| percent identity 36 in 199 aa.
       0.788
ECs1958
Putative antitermination protein; Probable aniterminator; weakly similar to antiterminator protein Q [Bacteriophage 21] gi|4539484|emb|CAB39993.1| percent identity 22 in 168 aa.
       0.773
ECs1619
Crossover junction endodeoxyribonuclease, similar to crossover junction endodeoxyribonucleases Rus e.g. [Escherichia coli bacteriophage 82] gi|2498868|sp|Q37873|RUS_BP82 percent identity 95 in 120 aa,GTG start.
     
 0.587
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.