STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2180Probable terminase small subunit,similar to terminase small subunits e.g. Nu1 [Bacteriophage lambda] percent identity 82 in 180 aa. (181 aa)    
Predicted Functional Partners:
ECs2179
Terminase large subunit (DNA-packaging protein),similar to terminase large subunits e.g. GpA [Bacteriophage lambda] gi|137616|sp|P03708|TERL_LAMBD percent identity 97 in 641 aa,GTG start.
  
    0.834
ECs2176
Minor capsid protein precursor,similar to minor capsid protein precursors e.g. GpC [Bacteriophage lambda] gi|137565|sp|P03711|VCAC_LAMBD percent identity 97 in 439 aa,contains capsid assembly protein Nu3-homolog.
  
    0.830
ECs2175
Head decoration protein (major capsid protein),similar to major capsid proteins e.g. GpD [Bacteriophage lambda] gi|137566|sp|P03712|VCAD_LAMBD percent identity 99 in 110 aa.
  
    0.813
ECs2177
Portal protein (minor capsid protein),similar to portal proteins e.g. GpB [Bacteriophage lambda] gi|138762|sp|P03710|VMCB_LAMBD percent identity 98 in 533 aa.
  
    0.797
ECs2178
Head-to-tail joining,similar to head-to-tail joining proteins e.g. GpW [Bacteriophage lambda] gi|138415|sp|P03727|VHTJ_LAMBD percent identity 98 in 68 aa.
       0.776
ECs2174
Major capsid protein,similar to major capsid proteins e.g. GpE [Bacteriophage lambda] gi|116701|sp|P05481|HEAD_BPPH8 percent identity 87 in 341 aa.
  
    0.711
ECs2173
DNA-packaging,similar to DNA-packaging proteins e.g. GpFI [Bacteriophage lambda] gi|139324|sp|P03709|VPF1_LAMBD percent identity 98 in 132 aa.
  
    0.616
ECs2172
Tail attachment (minor capsid protein),similar to minor capsid proteins e.g. GpFII [Bacteriophage lambda] gi|137575|sp|P03714|VCF2_LAMBD percent identity 91 in 117 aa.
  
    0.543
ECs2168
Minor tail component,similar to minor tail proteins e.g. GpG [Bacteriophage lambda] gi|138842|sp|P03734|VMTG_LAMBD percent identity 43 in 140 aa.
  
    0.515
ECs2169
Unknown,probably corresponds to protein V [Bacteriophage lambda].
  
    0.509
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.