STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2334Hypothetical protein; Identical to B1625_ECOLI gi|1787912 (Conserved in E.coli K-12). (71 aa)    
Predicted Functional Partners:
ECs2335
Hypothetical protein; Similar to B1626_ECOLI gi|1787913 percent identity 98 in 154 aa (Conserved in E.coli K-12).
 
    0.921
ECs3530
DNA-binding protein; Similar to STPA_ECOLI gi|1789023 percent identity 100 in 134 aa (Conserved in E.coli K-12).
    
 0.905
ECs1739
DNA-binding protein H-NS; Similar to HNS_ECOLI gi|1787489 percent identity 100 in 137 aa (Conserved in E.coli K-12).
  
 
 0.893
ECs2310
Hypothetical protein; Similar to B1604_ECOLI gi|1787889 percent identity 99 in 314 aa (Conserved in E.coli K-12).
  
   
 0.800
ECs2653
Hypothetical protein; Similar to YECF_ECOLI gi|1788223 percent identity 98 in 74 aa (Conserved in E.coli K-12).
  
     0.772
ECs3073
Hypothetical protein; Similar to YEJG_ECOLI gi|1788507 percent identity 98 in 114 aa (Conserved in E.coli K-12).
  
     0.771
ECs1236
Putative outer membrane precursor; Also similar to ail gene products e.g. [Yersinia pseudotuberculosis] gi|5902750|sp|Q56957|AIL_YERPS percent identity 32 in 241 aa; also similar to outer membrane protein Lom precursor gi|138693|sp|P03701|VLOM_LAMBD percent identity 35 in 167 aa; also similar to virulence protein pagC precursor [Salmonella typhimurium] gi|129558|sp|P23988|PAGC_SALTY percent identity 29 in 180 aa; identical to putative Lom precursor [Bacteriophage 933W] gi|4585443|gb|AAD25471.1|AF125520_66 percent identity 100 in 244 aa; probable outer membrane precursor; similar to out [...]
  
     0.770
ECs4839
Hypothetical protein; N-terminal part (1-40 in 167 aa) is similar to B3913_ECOLI gi|2367330 percent identity 100 in 40 aa, C-terminal part (46-167 in 167 aa) is similar to B3914_ECOLI similar to gi|2367331 percent identity 100 in 122 aa.
  
     0.769
ECs2552
DNA polymerase III theta subunit; Similar to HOLE_ECOLI gi|1788147 percent identity 100 in 76 aa (Conserved in E.coli K-12).
  
     0.768
ECs4111
Hypothetical protein; Similar to YHCN_ECOLI gi|1789634 percent identity 100 in 104 aa (Conserved in E.coli K-12).
  
     0.767
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.