STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2337Hypothetical protein; Similar to B1628_ECOLI gi|1787915 percent identity 99 in 192 aa (Conserved in E.coli K-12). (192 aa)    
Predicted Functional Partners:
ECs2336
Hypothetical protein; Similar to B1627_ECOLI gi|1787914 percent identity 100 in 193 aa (Conserved in E.coli K-12).
 
 
 0.998
ECs2338
Putative membrane protein; Similar to B1629_ECOLI gi|1787916 percent identity 97 in 735 aa but differs at C-ter (Conserved in E.coli K-12).
 
 0.998
ECs2339
Hypothetical protein; Similar to YDGO_ECOLI gi|1787917 percent identity 99 in 352 aa (Conserved in E.coli K-12).
 
 
 0.997
ECs2341
Hypothetical protein; Similar to YDGQ_ECOLI gi|1787919 percent identity 99 in 231 aa (Conserved in E.coli K-12).
 
 
 0.997
ECs2340
Hypothetical protein; Similar to B1631_ECOLI gi|1787918 percent identity 99 in 206 aa (Conserved in E.coli K-12).
 
 
 0.996
ECs2000
Putative oxidoreductase; Similar to YDBK_ECOLI gi|1787642 percent identity 99 in 1174 aa (Conserved in E.coli K-12).
     
 0.905
ECs2342
Endonuclease III; Similar to NTH_ECOLI gi|1787920 percent identity 99 in 211 aa (Conserved in E.coli K-12).
  
  
 0.844
ECs3480
Hypothetical protein; Similar to B2618_ECOLI gi|1788971 percent identity 97 in 102 aa (Conserved in E.coli K-12).
 
   
 0.812
ECs2335
Hypothetical protein; Similar to B1626_ECOLI gi|1787913 percent identity 98 in 154 aa (Conserved in E.coli K-12).
  
    0.774
ECs3103
Hypothetical protein; Similar to YOJL_ECOLI gi|1788543 percent identity 100 in 351 aa (Conserved in E.coli K-12).
 
   
 0.676
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.