STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2361Similar to RNT_ECOLI gi|1787941 percent identity 99 in 215 aa (Conserved in E.coli K-12). (215 aa)    
Predicted Functional Partners:
ECs2513
RNase D, processes tRNA precursor; Similar to RND_ECOLI gi|1788105 percent identity 99 in 375 aa (Conserved in E.coli K-12).
  
 
 0.883
ECs5141
Hypothetical protein; Similar to YJER_ECOLI gi|1790606 percent identity 99 in 204 aa (Conserved in E.coli K-12).
  
 
 0.855
ECs3156
Hypothetical protein; Similar to ELAC_ECOLI gi|1788603 percent identity 98 in 311 aa (Conserved in E.coli K-12).
   
  
 0.828
ECs5155
Putative enzyme; Similar to VACB_ECOLI gi|1790622 percent identity 99 in 827 aa (Conserved in E.coli K-12).
   
 
 0.822
ECs4045
Polynucleotide phosphorylase; Similar to PNP_ECOLI gi|1789555 percent identity 99 in 734 aa (Conserved in E.coli K-12).
   
 
 0.808
ECs1859
RNase II, mRNA degradation; Similar to RNB_ECOLI gi|1787542 percent identity 99 in 644 aa (Conserved in E.coli K-12).
     
 0.806
ECs1462
Similar to RNE_ECOLI gi|1787325 percent identity 98 in 1061 aa (Conserved in E.coli K-12).
     
 0.805
ECs1604
Hypothetical protein; Similar to YCFC_ECOLI gi|1787377 percent identity 99 in 213 aa (Conserved in E.coli K-12).
  
    0.723
ECs3939
tRNA nucleotidyl transferase; Similar to CCA_ECOLI gi|1789436 percent identity 98 in 412 aa (Conserved in E.coli K-12).
 
  
 0.703
ECs4636
DNA polymerase III beta-subunit; Similar to DNAN_ECOLI gi|1790136 percent identity 100 in 366 aa (Conserved in E.coli K-12).
  
 0.702
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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