STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2371Riboflavin synthase alpha chain; Similar to RIBE_ECOLI gi|1787952 percent identity 99 in 213 aa (Conserved in E.coli K-12). (213 aa)    
Predicted Functional Partners:
ECs0467
Bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis; Similar to RIBD_ECOLI gi|1786616 percent identity 97 in 367 aa (Conserved in E.coli K-12).
  
 0.998
ECs0468
Riboflavin synthase beta chain; Similar to RIBH_ECOLI gi|1786617 percent identity 100 in 156 aa (Conserved in E.coli K-12).
 
 0.998
ECs1850
GTP cyclohydrolase II; Similar to RIBA_ECOLI gi|1787533 percent identity 100 in 196 aa (Conserved in E.coli K-12).
 
 0.997
ECs3929
3,4 dihydroxy-2-butanone-4-phosphate synthase; Similar to RIBB_ECOLI gi|1789420 percent identity 100 in 217 aa (Conserved in E.coli K-12).
  
 0.996
ECs0028
Putative regulator; Similar to RIBF_ECOLI gi|1786208 percent identity 100 in 313 aa (Conserved in E.coli K-12).
  
 
 0.964
ECs4772
Ferrisiderophore reductase; Similar to UBIB_ECOLI gi|2367314 percent identity 100 in 233 aa (Conserved in E.coli K-12).
    
  0.902
ECs4742
Putative phosphatase; Similar to YIGB_ECOLI gi|2367295 percent identity 99 in 238 aa (Conserved in E.coli K-12).
   
 
 0.901
ECs0924
Hypothetical protein; Similar to B0844_ECOLI gi|1787067 percent identity 98 in 262 aa (Conserved in E.coli K-12).
     
 0.900
ECs1136
Similar to phosphoanhydride phosphorylase APPA_ECOLI gi|1787215 percent identity 98 in 434 aa (Conserved in E.coli K-12).
     
  0.900
ECs5037
Diadenosine tetraphosphatase; Similar to APHA_ECOLI gi|2367341 percent identity 99 in 237 aa (Conserved in E.coli K-12).
     
  0.900
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.