STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2448Hypothetical protein; Similar to B1742_ECOLI gi|1788038 percent identity 98 in 212 aa (Conserved in E.coli K-12). (212 aa)    
Predicted Functional Partners:
ECs2449
Spheroplast protein Y; Similar to SPY_ECOLI gi|1788039 percent identity 99 in 161 aa (Conserved in E.coli K-12).
 
     0.546
ECs5091
Putative vimentin; Similar to YJDA_ECOLI gi|1790548 percent identity 99 in 742 aa (Conserved in E.coli K-12).
  
    0.542
ECs1493
Hypothetical protein; Similar to YCFT_ECOLI gi|1787359 percent identity 98 in 357 aa (Conserved in E.coli K-12).
  
     0.541
ECs4823
Putative frv operon regulatory protein; Similar to FRVR_ECOLI gi|1790331 percent identity 98 in 582 aa (Conserved in E.coli K-12).
  
     0.541
ECs5234
Hypothetical protein; Similar to part (5-393 in 393 aa)of YJGN_ECOLI gi|2367367 percent identity 96 in 389 aa (Conserved in E.coli K-12).
  
     0.537
ECs5317
Hypothetical protein; Similar to YJJM_ECOLI gi|1790818 percent identity 99 in 268 aa (Conserved in E.coli K-12).
  
     0.536
ECs2058
Putative transferase; Similar to B1454_ECOLI gi|1787726 percent identity 97 in 205 aa (Conserved in E.coli K-12).
  
     0.490
ECs1691
Hypothetical protein; Similar to N-terminal part (1-198 in 244 aa) of YCGR_ECOLI gi|1787443 percent identity 96 in 198 aa, GTG start.
  
    0.483
ECs2850
Putative galactokinase; Similar to WCAK_ECOLI gi|1788358 percent identity 99 in 426 aa (Conserved in E.coli K-12).
  
     0.458
ECs1889
Hypothetical protein; Similar to C-terminal part (225-430 in 430 aa) of putative transport periplasmic protein B1310_ECOLI gi|1787569 percent identity 96 in 205 aa.
  
     0.434
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.