STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2512Putative diogenase beta subunit; Similar to YEAX_ECOLI gi|1788104 percent identity 98 in 321 aa (Conserved in E.coli K-12). (321 aa)    
Predicted Functional Partners:
ECs2511
Hypothetical protein; Similar to YEAW_ECOLI gi|1788103 percent identity 100 in 374 aa (Conserved in E.coli K-12).
 
 
 0.999
ECs3170
NADH dehydrogenase I chain C/D; Similar to NUOC_ECOLI gi|1788622 percent identity 99 in 600 aa (Conserved in E.coli K-12).
  
 0.958
ECs2000
Putative oxidoreductase; Similar to YDBK_ECOLI gi|1787642 percent identity 99 in 1174 aa (Conserved in E.coli K-12).
  
 0.932
ECs4836
Hypothetical protein; Similar to YIIM_ECOLI gi|1790345 percent identity 99 in 234 aa (Conserved in E.coli K-12).
   
 0.926
ECs3408
Phenylpropionate dioxygenase ferredoxin reductase subunit; Similar to HCAD_ECOLI gi|1788892 percent identity 97 in 400 aa (Conserved in E.coli K-12).
 
 
 0.833
ECs3404
Phenylpropionate dioxygenase large terminal subunit; Similar to HCAA1_ECOLI gi|1788888 percent identity 100 in 453 aa (Conserved in E.coli K-12).
 
  
 0.797
ECs4256
Hypothetical protein; Similar to YHGI_ECOLI gi|1789819 percent identity 100 in 191 aa (Conserved in E.coli K-12).
  
 
 0.772
ECs3395
NifU-like protein; Similar to ISCU_ECOLI gi|7387937|sp|P77310 percent identity 100 in 128 aa (Conserved in E.coli K-12).
  
 0.718
ECs3171
NADH dehydrogenase I chain B; Similar to NUOB_ECOLI gi|1788624 percent identity 100 in 220 aa (Conserved in E.coli K-12).
  
  0.717
ECs3330
Putative oxidoreductase Fe-S subunit; Similar to YFFG_ECOLI gi|1788811 percent identity 99 in 659 aa (Conserved in E.coli K-12).
   
 0.706
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.