STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2583Putative cytochrome C-type protein; Similar to YECK_ECOLI gi|1788181 percent identity 98 in 366 aa (Conserved in E.coli K-12). (366 aa)    
Predicted Functional Partners:
ECs2582
Biotin sulfoxide reductase 2; Similar to BISZ_ECOLI gi|1788180 percent identity 98 in 815 aa (Conserved in E.coli K-12).
 
 0.999
ECs1152
Trimethylamine N-oxide reductase subunit; Similar to TORA_ECOLI gi|1787231 percent identity 99 in 847 aa (Conserved in E.coli K-12).
 
 0.990
ECs1153
Part of trimethylamine-N-oxide oxidoreductase; Similar to TORD_ECOLI gi|1787232 percent identity 96 in 199 aa (Conserved in E.coli K-12).
 
 
 0.964
ECs1151
Trimethylamine N-oxide reductase cytochrome c-type subunit; Similar to TORC_ECOLI gi|1787230 percent identity 99 in 390 aa (Conserved in E.coli K-12).
  
  
 
0.917
ECs3092
Cytochrome c-type protein; Similar to NAPB_ECOLI gi|1788531 percent identity 100 in 156 aa (Conserved in E.coli K-12).
 
  
 0.913
ECs3095
Probable nitrate reductase 3; Similar to NAPA_ECOLI gi|1788534 percent identity 99 in 828 aa (Conserved in E.coli K-12).
 
 0.912
ECs4436
Biotin sulfoxide reductase; Similar to BISC_ECOLI gi|1789973 percent identity 98 in 739 aa (Conserved in E.coli K-12).
 
 0.881
ECs3093
Ferredoxin-type protein; Similar to NAPH_ECOLI gi|1788532 percent identity 99 in 287 aa (Conserved in E.coli K-12).
 
 
 0.875
ECs3097
Ferredoxin-type protein; Similar to NAPF_ECOLI gi|1788536 percent identity 99 in 164 aa (Conserved in E.coli K-12).
 
  
 0.870
ECs3094
Ferredoxin-type protein; Similar to NAPG_ECOLI gi|1788533 percent identity 99 in 231 aa (Conserved in E.coli K-12).
 
  
 0.782
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.