STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2879Similar to putative chaperonin B2070_ECOLI gi|1788385 percent identity 95 in 591 aa (Conserved in E.coli K-12). (591 aa)    
Predicted Functional Partners:
ECs2880
Hypothetical protein; Similar to B2072_ECOLI gi|1788387 percent identity 91 in 251 aa (Conserved in E.coli K-12).
 
   
 0.952
ECs2881
Hypothetical protein; Similar to B2073_ECOLI gi|1788388 percent identity 98 in 219 aa (Conserved in E.coli K-12).
  
 0.888
ECs1840
Hypothetical protein; N-terminal part (1-278 in 527 aa) is similar to N-terminal part (1-278 in 631 aa) YCIQ_ECOLI gi|1787522 percent identity 95 in 278 aa, C-terminal part (286-527 in 527 aa) is similar to C-terminal part (378-631 in 631 aa) YCIQ_ECOLI gi|1787522 percent.
  
   
 0.887
ECs3116
Putative ATP-binding component of a transport system; Similar to YFAL_ECOLI gi|1788565 percent identity 95 in 1250 aa (Conserved in E.coli K-12).
  
     0.751
ECs3159
Hypothetical protein; Similar to YFBM_ECOLI gi|1788608 percent identity 98 in 167 aa (Conserved in E.coli K-12).
  
     0.749
ECs2929
Hypothetical protein; Similar to C-terminal part (517-759 in 759 aa) YEHM_ECOLI gi|1788439 percent identity 97 in 243 aa.
  
     0.744
ECs3515
Putative ATP-binding component of a transport system; Similar to YPJA_ECOLI gi|1789001 percent identity 97 in 1571 aa (Conserved in E.coli K-12).
  
     0.744
ECs4391
Hypothetical protein; Similar to HDED_ECOLI gi|1789927 percent identity 100 in 190 aa (Conserved in E.coli K-12).
  
     0.736
ECs3249
Putative sensor for regulator EvgA; Similar to EVGS_ECOLI gi|1788713 percent identity 97 in 1197 aa (Conserved in E.coli K-12).
  
     0.701
ECs4244
Putative transport; Similar to YHGE_ECOLI gi|1789805 percent identity 95 in 574 aa (Conserved in E.coli K-12).
 
     0.701
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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