STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2975Antitermination protein,similar to antitermination proteins e.g. protein Q [Bacteriophage H-19B] percent identity 95 in 144 aa. (144 aa)    
Predicted Functional Partners:
ECs2976
Unknown,similar to hypothetical proteins e.g. Nin 68 [Bacteriophage lambda] gi|1351593|sp|P03771|Y68_LAMBD percent identity 80 in 60 aa.
       0.773
ECs2977
Unknown,similar to hypothetical proteins e.g. NinG protein [Bacteriophage 21] gi|4539482|emb|CAB39991.1| percent identity 90 in 201 aa.
       0.773
ECs2978
Unknown,similar to hypothetical proteins e.g., NinF [Bacteriophage P22] gi|512350|emb|CAA55162.1| percent identity 96 in 58 aa.
       0.773
ECs2979
Hypothetical protein.
       0.773
ECs2980
Unknown,identical to hypothetical protein [Bacteriophage VT2-Sa] gi|5881625|dbj|BAA84316.1|,similar to Nin E proteins e.g. [Bacteriophage 21] percent identity 100 in 57 aa.
       0.773
ECs2981
Probable DNA methylase,similar to hypothetical proteins e.g. [Bacteriophage VT2-Sa] gi|5881624|dbj|BAA84315.1| percent identity 98 in 175, also similar to DNA N-6-adenine-methyltransferase [Bacteriophage T1] percent identity 31 in 143 aa.
       0.773
ECs2982
Unknown,similar to hypothetical proteins e.g. [Bacteriophage 933W] gi|4585410|gb|AAD25438.1|AF125520_33 percent identity 98 in 148 aa, Nin B [Bacteriophage 21] gi|4539479|emb|CAB39988.1| percent identity 43 in 147 aa.
       0.773
ECs2983
Unknown,similar to hypothetical proteins e.g. [Bacteriophage 933W] gi|4585409|gb|AAD25437.1|AF125520_32 percent identity 99 in 109 aa,GTG start.
       0.773
ECs2984
Unknown,similar to hypothetical proteins e.g. [Bacteriophage 933W] gi|4499788|emb|CAB39287.1| percent identity 97 in 92 aa.
       0.463
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.