STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2984Unknown,similar to hypothetical proteins e.g. [Bacteriophage 933W] gi|4499788|emb|CAB39287.1| percent identity 97 in 92 aa. (92 aa)    
Predicted Functional Partners:
ECs2985
Ren protein,similar to Ren proteins e.g. [Bacteriophage lambda] gi|139473|sp|P03761|VREN_LAMBD percent identity 97 in 96 aa.
       0.574
ECs2986
Phage replication protein P,similar to phage replication protein P e.g. [Bacteriophage lambda] gi|139488|sp|P03689|VRPP_LAMBD percent identity 97 in 233 aa.
       0.574
ECs2987
Phage replication protein O, similar to phage replication protein O e.g. [Bacteriophage 933W] gi|4585405|gb|AAD25433.1|AF125520_28 percent identity 99 in 312 aa.
       0.574
ECs2988
Regulatory protein CII,similar to regulatory protein CII e.g. [Bacteriophage 933W] gi|4585404|gb|AAD25432.1|AF125520_27 percent identity 94 in 98 aa.
       0.503
ECs2975
Antitermination protein,similar to antitermination proteins e.g. protein Q [Bacteriophage H-19B] percent identity 95 in 144 aa.
       0.463
ECs2976
Unknown,similar to hypothetical proteins e.g. Nin 68 [Bacteriophage lambda] gi|1351593|sp|P03771|Y68_LAMBD percent identity 80 in 60 aa.
       0.463
ECs2977
Unknown,similar to hypothetical proteins e.g. NinG protein [Bacteriophage 21] gi|4539482|emb|CAB39991.1| percent identity 90 in 201 aa.
       0.463
ECs2978
Unknown,similar to hypothetical proteins e.g., NinF [Bacteriophage P22] gi|512350|emb|CAA55162.1| percent identity 96 in 58 aa.
       0.463
ECs2979
Hypothetical protein.
       0.463
ECs2980
Unknown,identical to hypothetical protein [Bacteriophage VT2-Sa] gi|5881625|dbj|BAA84316.1|,similar to Nin E proteins e.g. [Bacteriophage 21] percent identity 100 in 57 aa.
       0.463
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.