STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3107Sensor for ctr capsule biosynthesis; Similar to RCSC_ECOLI gi|1788548 percent identity 99 in 933 aa (Conserved in E.coli K-12). (933 aa)    
Predicted Functional Partners:
ECs3105
Putative 2-component sensor protein; Similar to YOJN_ECOLI gi|1788545 percent identity 99 in 890 aa (Conserved in E.coli K-12).
 
0.994
ECs0198
Regulator in colanic acid synthesis RcsF; Similar to RCSF_ECOLI gi|1786394 percent identity 99 in 134 aa (Conserved in E.coli K-12).
  
  
 0.979
ECs3106
Positive response regulator for colanic capsule biosynthesis; Similar to RCSB_ECOLI gi|1788546 percent identity 100 in 216 aa (Conserved in E.coli K-12).
 
 
 
 0.959
ECs3646
Sensor-regulator protein barA; Similar to BARA_ECOLI gi|1789149 percent identity 100 in 918 aa (Conserved in E.coli K-12).
 
 
0.953
ECs4089
Aerobic respiration sensor-response protein; Similar to ARCB_ECOLI gi|1789603 percent identity 99 in 778 aa (Conserved in E.coli K-12).
 
 
0.951
ECs5074
Probable histidine protein kinase,similar to histidine protein kinases e.g. histidine protein kinase-response regulator hybrid protein CvgSY [Pseudomonas syringae pv. syringae] gi|5019771|gb|AAD37857.1|AF133263_2 percent identity 43 in 364 aa.
 
0.942
ECs3249
Putative sensor for regulator EvgA; Similar to EVGS_ECOLI gi|1788713 percent identity 97 in 1197 aa (Conserved in E.coli K-12).
 
 
0.918
ECs4240
Putative dehydrogenase; Similar to YRFF_ECOLI gi|1789801 percent identity 99 in 711 aa (Conserved in E.coli K-12).
  
   
 0.908
ECs1148
Sensor protein torS; Similar to TORS_ECOLI gi|1787227 percent identity 97 in 904 aa (Conserved in E.coli K-12).
 
 
0.888
ECs3954
Aerotaxis sensor receptor; Similar to AER_ECOLI gi|1789453 percent identity 99 in 506 aa (Conserved in E.coli K-12).
 
 0.873
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.