STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3112Hypothetical protein; Similar to B2229_ECOLI gi|1788560 percent identity 99 in 216 aa (Conserved in E.coli K-12). (216 aa)    
Predicted Functional Partners:
ECs3113
Hypothetical protein; Similar to part (161-578 in 578 aa) of YFAA_ECOLI gi|1788561 percent identity 98 in 418 aa.
  
  
 0.979
ECs3111
Putative membrane protein; N-terminal part (31-1372 in 1539 aa) is similar to putative membrane protein B2228_ECOLI gi|1788559 percent identity 98 in 1337 aa, C-terminal part (1380-1539 in 1539 aa) is similar B2227_ECOLI to gi|1788558 percent identity 98 in 160 aa.
 
    0.967
ECs3108
Hypothetical protein; Similar to B2225_ECOLI gi|1788556 percent identity 99 in 258 aa (Conserved in E.coli K-12).
 
  
 0.966
ECs3110
Hypothetical protein; Similar to N-terminal part (1-264 in 549 aa) of B2226_ECOLI gi|1788557 percent identity 98 in 264 aa.
  
  
 0.918
ECs3109
Hypothetical protein; Similar to C-terminal part (317-549 in 549 aa) of B2226_ECOLI gi|1788557 percent identity 98 in 233 aa, TTG start.
  
  
 0.810
ECs2929
Hypothetical protein; Similar to C-terminal part (517-759 in 759 aa) YEHM_ECOLI gi|1788439 percent identity 97 in 243 aa.
  
     0.740
ECs3116
Putative ATP-binding component of a transport system; Similar to YFAL_ECOLI gi|1788565 percent identity 95 in 1250 aa (Conserved in E.coli K-12).
  
     0.733
ECs3515
Putative ATP-binding component of a transport system; Similar to YPJA_ECOLI gi|1789001 percent identity 97 in 1571 aa (Conserved in E.coli K-12).
  
     0.733
ECs3159
Hypothetical protein; Similar to YFBM_ECOLI gi|1788608 percent identity 98 in 167 aa (Conserved in E.coli K-12).
  
     0.708
ECs4391
Hypothetical protein; Similar to HDED_ECOLI gi|1789927 percent identity 100 in 190 aa (Conserved in E.coli K-12).
  
     0.707
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.