STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3122Probable transcriptional regulator; similar to putative transcriptional regulators e.g. YvbU [Bacillus subtilis] gi|6648030|sp|O32255 percent identity 32 in 266 aa. (292 aa)    
Predicted Functional Partners:
ECs3998
Transcriptional activator of tdc operon; Similar to TDCA_ECOLI gi|1789506 percent identity 100 in 312 aa (Conserved in E.coli K-12).
  
     0.759
ECs0565
Putative transcriptional regulator LYSR-type; Similar to YBBS_ECOLI gi|1786713 percent identity 100 in 308 aa (Conserved in E.coli K-12).
  
     0.735
ECs3173
Transcriptional regulator LYSR-type; Similar to LRHA_ECOLI gi|1788626 percent identity 99 in 312 aa (Conserved in E.coli K-12).
  
     0.708
ECs3121
Probable antibiotic resistance protein; similar to antibiotic resistance protein homolog YwoG [Bacillus subtilis] gi|7474437|pir||B70065 percent identity 38 in 381 aa.
 
     0.685
ECs0333
Probable transcriptional regulator,similar to transcriptional regulators e.g. [Escherichia coli] gi|2495398|sp|P75836|YCAN_ECOLI percent identity 38 in 291 aa.
  
     0.677
ECs0365
Hypothetical protein; Similar to N-terminal part (1-188 in 310 aa) of YAHB_ECOLI gi|1786508 percent identity 98 in 188 aa.
  
     0.677
ECs4401
Putative transcriptional regulator LYSR-type; Similar to YHJC_ECOLI gi|1789938 percent identity 98 in 323 aa (Conserved in E.coli K-12).
  
     0.676
ECs3943
Putative transcriptional regulator LYSR-type; Similar to YGIP_ECOLI gi|1789440 percent identity 99 in 310 aa (Conserved in E.coli K-12).
  
     0.613
ECs2508
Putative transcriptional regulator LYSR-type; Similar to YEAT_ECOLI gi|1788100 percent identity 99 in 314 aa (Conserved in E.coli K-12).
  
     0.612
ECs2368
Putative transcriptional regulator LYSR-type; Similar to YDHB_ECOLI gi|1787949 percent identity 100 in 310 aa (Conserved in E.coli K-12).
  
     0.588
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.