STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3245D-serine dehydratase; Similar to DSDA_ECOLI gi|1788708 percent identity 99 in 442 aa (Conserved in E.coli K-12). (442 aa)    
Predicted Functional Partners:
ECs2523
L-serine deaminase; Similar to SDAA_ECOLI gi|1788116 percent identity 99 in 454 aa, similar to SDAB_ECOLI gi|1789161 percent identity 77 in 454 aa (Conserved in E.coli K-12).
     
 0.926
ECs3657
L-serine dehydratase; Similar to SDAA_ECOLI gi|1788116 percent identity 77 in 455 aa, similar to SDAB_ECOLI gi|1789161 percent identity 99 in 455 aa (Conserved in E.coli K-12).
     
 0.926
ECs3992
L-serine deaminase; N-terminal part (1-133 in 454 aa) is similar to YHAQ_ECOLI gi|1789500 percent identity 99 in 135 aa, C-terminal part (180-454 in 454 aa) is similar to YHAP_ECOLI gi|1789498 percent identity 99 in 275 aa, also similar to L-serine deaminase gi|1788116.
     
 0.913
ECs3997
Threonine dehydratase; Similar to TDCB_ECOLI gi|1789505 percent identity 100 in 329 aa (Conserved in E.coli K-12).
     
 0.906
ECs4706
Threonine deaminase; Similar to ILVA_ECOLI gi|1790207 percent identity 99 in 514 aa (Conserved in E.coli K-12).
     
 0.906
ECs1410
Putative dehydrogenase; Similar to YCDW_ECOLI gi|1787270 percent identity 98 in 325 aa (Conserved in E.coli K-12).
     
  0.800
ECs2021
Aldehyde dehydrogenase; Similar to ALDA_ECOLI gi|1787684 percent identity 99 in 479 aa (Conserved in E.coli K-12).
     
  0.800
ECs2360
Lactoylglutathione lyase; Similar to GLOA_ECOLI gi|1787940 percent identity 100 in 135 aa (Conserved in E.coli K-12).
     
  0.800
ECs2705
Hypothetical protein; Similar to YEDU_ECOLI gi|1788278 percent identity 99 in 283 aa (Conserved in E.coli K-12).
     
  0.800
ECs4438
Putative dehydrogenase; Similar to YIAE_ECOLI gi|2367243 percent identity 99 in 328 aa (Conserved in E.coli K-12).
     
  0.800
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.