STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3273Hypothetical protein; Similar to YFEA_ECOLI gi|1788739 percent identity 99 in 729 aa but differs at N-ter (Conserved in E.coli K-12). (729 aa)    
Predicted Functional Partners:
ECs2876
Hypothetical protein; Similar to C-terminal part (314-1105 in 1105 aa) of putative sensor-type protein YEGE_ECOLI gi|1788381 percent identity 98 in 794 aa.
 
 
 0.907
ECs3646
Sensor-regulator protein barA; Similar to BARA_ECOLI gi|1789149 percent identity 100 in 918 aa (Conserved in E.coli K-12).
  
  
 0.893
ECs4089
Aerobic respiration sensor-response protein; Similar to ARCB_ECOLI gi|1789603 percent identity 99 in 778 aa (Conserved in E.coli K-12).
  
 
 0.883
ECs2503
Hypothetical protein; Similar to YAEP_ECOLI gi|1788095 percent identity 98 in 281 aa but differs at both N-ter and C-ter, GTG start (Conserved in E.coli K-12).
 
  
 0.860
ECs2495
Hypothetical protein; Similar to YEAJ_ECOLI gi|1788086 percent identity 99 in 556 aa (Conserved in E.coli K-12).
  
  
 0.847
ECs1925
Hypothetical protein; Similar to B1341_ECOLI gi|1787603 percent identity 99 in 430 aa (Conserved in E.coli K-12).
 
 0.842
ECs3249
Putative sensor for regulator EvgA; Similar to EVGS_ECOLI gi|1788713 percent identity 97 in 1197 aa (Conserved in E.coli K-12).
  
  
 0.819
ECs2494
Hypothetical protein; Similar to part (45-491 in 491 aa) of YEAI_ECOLI gi|1788085 percent identity 99 in 491 aa (Conserved in E.coli K-12).
  
  
 0.817
ECs2095
Hypothetical protein; Similar to B1490_ECOLI gi|1787766 percent identity 100 in 460 aa (Conserved in E.coli K-12).
  
  
 0.803
ECs1148
Sensor protein torS; Similar to TORS_ECOLI gi|1787227 percent identity 97 in 904 aa (Conserved in E.coli K-12).
 
  
 0.802
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.