STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3403Transcriptional activator of hca cluster; Similar to HCAR_ECOLI gi|1788887 percent identity 99 in 296 aa (Conserved in E.coli K-12). (296 aa)    
Predicted Functional Partners:
ECs3406
Phenylpropionate dioxygenase ferredoxin subunit; Similar to HCAC_ECOLI gi|1788890 percent identity 100 in 106 aa (Conserved in E.coli K-12).
     
 0.818
ECs3404
Phenylpropionate dioxygenase large terminal subunit; Similar to HCAA1_ECOLI gi|1788888 percent identity 100 in 453 aa (Conserved in E.coli K-12).
     
 0.811
ECs4116
Putative transcriptional regulator LYSR-type; Similar to YHCS_ECOLI gi|1789639 percent identity 100 in 309 aa (Conserved in E.coli K-12).
  
    0.762
ECs0365
Hypothetical protein; Similar to N-terminal part (1-188 in 310 aa) of YAHB_ECOLI gi|1786508 percent identity 98 in 188 aa.
  
     0.760
ECs3173
Transcriptional regulator LYSR-type; Similar to LRHA_ECOLI gi|1788626 percent identity 99 in 312 aa (Conserved in E.coli K-12).
  
     0.732
ECs3943
Putative transcriptional regulator LYSR-type; Similar to YGIP_ECOLI gi|1789440 percent identity 99 in 310 aa (Conserved in E.coli K-12).
  
    0.720
ECs4401
Putative transcriptional regulator LYSR-type; Similar to YHJC_ECOLI gi|1789938 percent identity 98 in 323 aa (Conserved in E.coli K-12).
  
     0.719
ECs0333
Probable transcriptional regulator,similar to transcriptional regulators e.g. [Escherichia coli] gi|2495398|sp|P75836|YCAN_ECOLI percent identity 38 in 291 aa.
  
    0.710
ECs2508
Putative transcriptional regulator LYSR-type; Similar to YEAT_ECOLI gi|1788100 percent identity 99 in 314 aa (Conserved in E.coli K-12).
  
    0.695
ECs1910
Putative transcriptional regulator LYSR-type; Similar to YCJZ_ECOLI gi|1787589 percent identity 99 in 299 aa (Conserved in E.coli K-12).
  
    0.675
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.