STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3440Quinolinate synthetase B protein; Similar to NADB_ECOLI gi|1788928 percent identity 99 in 540 aa (Conserved in E.coli K-12). (540 aa)    
Predicted Functional Partners:
ECs0778
Quinolinate synthetase A protein; Similar to NADA_ECOLI gi|1786964 percent identity 99 in 347 aa (Conserved in E.coli K-12).
 
 0.999
ECs0113
Quinolinate phosphoribosyltransferase; Similar to NADC_ECOLI gi|1786299 percent identity 99 in 297 aa (Conserved in E.coli K-12).
  
 0.998
ECs5120
Aspartate ammonia-lyase; Similar to ASPA_ECOLI gi|1790581 percent identity 99 in 493 aa (Conserved in E.coli K-12).
 
   
 0.916
ECs5153
Adenylosuccinate synthetase; Similar to PURA_ECOLI gi|1790620 percent identity 100 in 432 aa (Conserved in E.coli K-12).
     
 0.914
ECs0246
Putative amidase-type enzyme; Similar to YAFV_ECOLI gi|1786412 percent identity 98 in 255 aa (Conserved in E.coli K-12).
    
 0.912
ECs4052
Argininosuccinate synthetase; Similar to ARGG_ECOLI gi|1789563 percent identity 99 in 447 aa (Conserved in E.coli K-12).
     
 0.912
ECs2474
Cytoplasmic L-asparaginase I; Similar to ANSA_ECOLI gi|1788065 percent identity 100 in 338 aa (Conserved in E.coli K-12).
   
 
 0.911
ECs3833
Periplasmic L-asparaginase II; Similar to ANSB_ECOLI gi|1789327 percent identity 98 in 348 aa (Conserved in E.coli K-12).
   
 
 0.911
ECs5222
Aspartate carbamoyltransferase catalytic subunit; Similar to PYRB_ECOLI gi|2367364 percent identity 100 in 311 aa (Conserved in E.coli K-12).
     
 0.901
ECs0704
Asparagine synthetase B; Similar to ASNB_ECOLI gi|1786889 percent identity 99 in 554 aa (Conserved in E.coli K-12).
     
  0.900
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.